CD-HIT: accelerated for clustering the next-generation
WEBDec 1, 2012 · In response to the rapid increase in the amount of sequencing data produced by the next-generation sequencing technologies, we have developed a new CD-HIT program accelerated with a novel parallelization strategy and some other techniques to allow efficient clustering of such datasets.
CD-HIT: accelerated for clustering the next-generation sequencing …
WEBOct 11, 2012 · We tested and demonstrated that this new CD-HIT can achieve significant speedup over the previous CD-HIT using a single core, and its acceleration by multi-core computer can scale up well to a reasonable number of cores. Clustering on large datasets that normally runs for days can now finish in hours on multicore machines.
cdhit/doc/cdhit-user-guide.wiki at master · weizhongli/cdhit
WEBCD-HIT is a widely used program for clustering biological sequences to reduce sequence redundancy and improve the performance of other sequence analyses. CD-HIT was originally developed to cluster protein sequences to create reference databases with reduced redundancy (Li, et al., 2001) and was then extended to …
(PDF) CD-HIT: Accelerated for clustering the next
WEBOct 11, 2012 · Summary: CD-HIT is a widely used program for clustering biological sequences to reduce sequence redundancy and improve the performance of other sequence analyses. In response to the rapid...
CD-HIT: accelerated for clustering the next-generation sequencing data
WEBOct 11, 2012 · A new CD-HIT program accelerated with a novel parallelization strategy and some other techniques to allow efficient clustering of such datasets to reduce sequence redundancy and improve the performance of other sequence analyses is developed.
CD-HIT | Bioinformatics - ACM Digital Library
WEBDec 1, 2012 · In response to the rapid increase in the amount of sequencing data produced by the next-generation sequencing technologies, we have developed a new CD-HIT program accelerated with a novel parallelization strategy and some other techniques to allow efficient clustering of such datasets.
Zhu Li (Michael) - Google Scholar
WEB2022. Towards an understanding of benign overfitting in neural networks. Z Li, ZH Zhou, A Gretton. arXiv preprint arXiv:2106.03212. , 2021. 35. 2021. Kernel dependence regularizers and...
CD-HIT: accelerated for clustering the next-generation sequencing …
WEBOct 11, 2012 · In response to the rapid increase in the amount of sequencing data produced by the next-generation sequencing technologies, we have developed a new CD-HIT program accelerated with a novel parallelization strategy and some other techniques to allow efficient clustering of such datasets.
WEBOct 11, 2012 · CD-HIT was originally developed to cluster protein sequences to create reference databases with reduced redundancy (Li, et al., 2001) and was then extended to support clustering nucleotide se-
Limin FU | University of California, San Diego, California | UCSD ...
WEBZhengwei Zhu. [...] Weizhong Li. Summary: CD-HIT is a widely used program for clustering biological sequences to reduce sequence redundancy and improve the performance of other sequence analyses.